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<article role="main">
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<section id="sphinx">
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<h1>Sphinx<a class="headerlink" href="#sphinx" title="Link to this heading">¶</a></h1>
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<p>The primary driver of this package’s documentation is Sphinx’s <code class="docutils literal notranslate"><span class="pre">autodoc</span></code> extension,
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using the <a class="reference external" href="https://pradyunsg.me/furo/">Furo theme</a>.</p>
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<p><strong>High-level details</strong>:</p>
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<ul class="simple">
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<li><p><code class="docutils literal notranslate"><span class="pre">sphinx-apidoc</span></code> generates package-based documentation to the <code class="docutils literal notranslate"><span class="pre">_autoref/</span></code> directory,
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with navigation available under “Autoref” in the sidebar.</p></li>
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<li><p>Markdown-based documentation files are manually written under the <code class="docutils literal notranslate"><span class="pre">reference/</span></code>
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directory, showing up under “Contents” in the sidebar.</p></li>
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</ul>
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<section id="detailed-directory-structure">
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<h2>Detailed directory structure<a class="headerlink" href="#detailed-directory-structure" title="Link to this heading">¶</a></h2>
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<p>All files are placed under <code class="docutils literal notranslate"><span class="pre">docs/sphinx</span></code>:</p>
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<ul class="simple">
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<li><p><code class="docutils literal notranslate"><span class="pre">_</span></code>-prefixed are Sphinx-managed directories</p>
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<ul>
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<li><p><code class="docutils literal notranslate"><span class="pre">_build/html/</span></code> houses output HTML files</p></li>
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<li><p><code class="docutils literal notranslate"><span class="pre">_autoref/</span></code> is the target for module-based RST files written by <code class="docutils literal notranslate"><span class="pre">autodoc</span></code></p></li>
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</ul>
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</li>
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<li><p><code class="docutils literal notranslate"><span class="pre">reference/</span></code>: houses all manually written documentation (totally separate from
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auto-generated package docs)</p></li>
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<li><p><code class="docutils literal notranslate"><span class="pre">conf.py</span></code>: single Sphinx configuration file</p></li>
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<li><p><code class="docutils literal notranslate"><span class="pre">index.md</span></code>: documentation index, setups up a persistent sidebar across all other pages</p></li>
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</ul>
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<p>For manually written documentation under <code class="docutils literal notranslate"><span class="pre">reference/</span></code>, topics are nested as needed. Within
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a nested directory <code class="docutils literal notranslate"><span class="pre">reference/<topic></span></code>, an <code class="docutils literal notranslate"><span class="pre">index.md</span></code> should created with content like:</p>
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<div class="highlight-default notranslate"><div class="highlight"><pre><span></span># <Topic>
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\`\`\`{toctree}
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:hidden:
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sub-topic-1.rst
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sub-topic-2.rst
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...
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\`\`\`
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</pre></div>
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||
</div>
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<p>This will add the nested directory to the sidebar navigation, using the name set under the
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top-level header. See [Markdown syntax][#markdown-syntax] for more details on the syntax.</p>
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</section>
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<section id="sphinx-autodoc">
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<h2>Sphinx autodoc<a class="headerlink" href="#sphinx-autodoc" title="Link to this heading">¶</a></h2>
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<p>Sphinx’s <code class="docutils literal notranslate"><span class="pre">autodoc</span></code> extension allows automatic generation of documents according to
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(Python) subpackage structure and available docstrings. A few notes here:</p>
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||
<ul>
|
||
<li><p>In the <code class="docutils literal notranslate"><span class="pre">conf.py</span></code> file, autodoc is enabled by adding <code class="docutils literal notranslate"><span class="pre">"sphinx.ext.autodoc"</span></code> to
|
||
the extensions list. <code class="docutils literal notranslate"><span class="pre">"sphinx.ext.viewcode"</span></code> can also be added to provide
|
||
links to source code.</p></li>
|
||
<li><p>Documents are actually generated by calling the <code class="docutils literal notranslate"><span class="pre">sphinx-apidoc</span></code> CLI command. The
|
||
current Makefile uses the following call:</p>
|
||
<div class="highlight-sh notranslate"><div class="highlight"><pre><span></span>sphinx-apidoc<span class="w"> </span>--module-first<span class="w"> </span>-o<span class="w"> </span>docs/sphinx/_autoref/<span class="w"> </span>localsys
|
||
</pre></div>
|
||
</div>
|
||
<p>This writes the automatically generated docs for modules in the package at the
|
||
local directory <code class="docutils literal notranslate"><span class="pre">localsys/</span></code> to the <code class="docutils literal notranslate"><span class="pre">docs/sphinx/_autoref</span></code> directory. These are
|
||
reStructuredText files by default.</p>
|
||
<ul class="simple">
|
||
<li><p><code class="docutils literal notranslate"><span class="pre">--module-first</span></code> places the module-level descriptions at the top of the module page.
|
||
By default, this is placed at the bottom (oddly), and can be obscured by large lists
|
||
of subpackages if this flag isn’t provided.</p></li>
|
||
<li><p>See available <code class="docutils literal notranslate"><span class="pre">sphinx-apidoc</span></code> options <a class="reference external" href="https://www.sphinx-doc.org/en/master/man/sphinx-apidoc.html">here</a>, as well as more advanced config
|
||
<a class="reference external" href="https://www.sphinx-doc.org/en/master/usage/extensions/autodoc.html#">here</a>.</p></li>
|
||
</ul>
|
||
</li>
|
||
</ul>
|
||
</section>
|
||
<section id="markdown-syntax">
|
||
<h2>Markdown syntax<a class="headerlink" href="#markdown-syntax" title="Link to this heading">¶</a></h2>
|
||
<p>The <code class="docutils literal notranslate"><span class="pre">myst_parser</span></code> extension enables Markdown (or something close to it) to be used when
|
||
writing documentation files. The Sphinx directives can be difficult to track, and
|
||
they change slightly under the MyST Markdown syntax. The following are a few common
|
||
blocks:</p>
|
||
<p><strong>Page hierarchies</strong>: the following will generate link hierarchy according to the provided
|
||
pages:</p>
|
||
<div class="highlight-default notranslate"><div class="highlight"><pre><span></span>\`\`\`{toctree}
|
||
:maxdepth: <n>
|
||
:caption: <caption>
|
||
:hidden:
|
||
|
||
example-file-1
|
||
example-file-2
|
||
example-dir/index
|
||
...
|
||
\`\`\`
|
||
</pre></div>
|
||
</div>
|
||
<ul class="simple">
|
||
<li><p><code class="docutils literal notranslate"><span class="pre">:maxdepth:</span></code> limits the depth of nesting</p></li>
|
||
<li><p><code class="docutils literal notranslate"><span class="pre">:caption:</span></code> title for the group of pages</p></li>
|
||
<li><p><code class="docutils literal notranslate"><span class="pre">:hidden:</span></code> if provided, links will only show in the sidebar (hidden on the page)</p></li>
|
||
<li><p>Constituent files: listed files will be rendered as a link directly. If a listed file
|
||
has a <code class="docutils literal notranslate"><span class="pre">{toctree}</span></code> directive, this tree will be rendered in place of the page’s link as a
|
||
dropdown. The dropdown will be named according to the file’s top-level heading, and
|
||
clicking directly on the dropdown header will show that page’s content. Files found in
|
||
the tree will be placed as links under the dropdown, recursively subject to same rules
|
||
described here.</p></li>
|
||
</ul>
|
||
<p><strong>Include files</strong>: the following will include file content
|
||
pages:</p>
|
||
<div class="highlight-default notranslate"><div class="highlight"><pre><span></span>\`\`\`{include} README.md
|
||
\`\`\`
|
||
</pre></div>
|
||
</div>
|
||
<p><strong>Reference directives</strong></p>
|
||
</section>
|
||
</section>
|
||
|
||
</article>
|
||
</div>
|
||
<footer>
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||
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<div class="context">
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<span>Previous</span>
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<div class="title">Documentation</div>
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</div>
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<div class="bottom-of-page">
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<div class="left-details">
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<div class="copyright">
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Copyright © 2024, Sam Griesemer
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Made with <a href="https://www.sphinx-doc.org/">Sphinx</a> and <a class="muted-link" href="https://pradyunsg.me">@pradyunsg</a>'s
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<div class="toc-sticky toc-scroll">
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<span class="toc-title">
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On this page
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</span>
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</div>
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<div class="toc-tree-container">
|
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<div class="toc-tree">
|
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<ul>
|
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<li><a class="reference internal" href="#">Sphinx</a><ul>
|
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<li><a class="reference internal" href="#detailed-directory-structure">Detailed directory structure</a></li>
|
||
<li><a class="reference internal" href="#sphinx-autodoc">Sphinx autodoc</a></li>
|
||
<li><a class="reference internal" href="#markdown-syntax">Markdown syntax</a></li>
|
||
</ul>
|
||
</li>
|
||
</ul>
|
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|
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</div>
|
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</div>
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